Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015832168.1_cds_XP_016504816.1_18218
CDS Infomation

[gene=LOC107822760] [db_xref=GeneID:107822760] [protein=mitogen-activated protein kinase kinase kinase YODA-like isoform X3] [protein_id=XP_016504816.1] [location=complement(join(4589..4632,4731..4944,5558..5683,5761..5820,6138..6213,6294..6457,6555..6617,6987..7074,7175..7798,8486..8952))] [gbkey=CDS]
Sequence

ATGCGTTGGTGGCAGAGCGCGTTTTCATCTTCAACATCTTCATCTTCAACATCCTCTTTA
TCATCCAAAGTACACTCTGACGATAGTCTTATTCCCTCCTCCACCGGAGGAGGCATTCGT
TACACCTTAAAATCCGCTTTTTTCTTCGCCCGCAGACGCCGTCACGCACGTGCCAAAAAA
TTCCAGAACCTCGCAGAGAATGACGTGGATGATTGGCGTTCGCACTATTCAGAAAACGAG
AATTTGTCGTCGTCCAAATGTTCTTCCTCCTCCAACCGTCGTCCGCCTCCGCAACCTTTG
CCTTTGCCGGAACTCCAGCTGTTGCTCCGCCACGACGCCGATGCTGCGGTTTCGAATGAA
CCCAGCGTTCCGTTGCCGTCCCCCACAGACGCGCATAATTCCCATCATAAAACTGGAGAG
GAAAGAAATAAGGATACACATAAGGATGGTGTAGCGTCCCATGGGAGCAGATTATCAAGC
CAAGATGCTCGAAAGAAGAAAAAGGAGCACTTGGGAAGTCGATTGTCTAGGAAGACACCT
CAGAAGCTGCATGTTGCTGATAGAGTCTCTGCTATCAGGATCAGCGCGCCCATTAGTGCT
CCTACCACTCCTTATGCAAGTCCTGGACTCAGCCCGCTCAAAGCTGAGGATTTTTTAAGT
CCCAATTGCATGGCATTCCCTGGTGCTTTTCAAGTTTGTTCTGCCCCGGAGATGCCTCCA
TCGGACACCCCTCATTATCCGGGTTTCTCTTATAAAGTTATCCCGGAGAAAAATGCTTTT
AGTGTTGATAATTCTCCTCATCACAGTCCAAGAGCAAGTCCTTTGAGGAGTAGAAAGATC
GCAAGTGGATCTACATCGCCTTTGCATAACTTATTACCACACGAGAGCTCAGCAGCACGC
CGTGAGAGTAGTGCTCAGGGTAATGTCCATCCACTACCACTTCCTCCTTTAAGTGCCACT
CCGCCACAGCAGCCTTCGGCCATTCCACCAGTTTCCCCTAACGCAGAGCTGACGCCAATC
AAAGGCCAATGGCAAAAAGGGAAGCTTATTGGGCGTGGGACATTTGGAAGTGTATATGTT
GCATCAAACAGAGAGACTGGAGCTTTATGTGCAATGAAAGAAGTTGAATTATTACCGGAT
GACCCAAAATCTGCTGAGAGCATAAGGCAATTACAGCAGGAAATTAATGTTCTCAGTCAA
CTCAAGCACCCAAATATTGTCCAGTATTACGGCAGCGAAATAGTTGGTGACCGATTTTAC
ATTTATCTGGAATATGTTCATCCTGGTTCTATCAATAAATTCATCCATGACCATTGTGGA
GCAATTACAGAATCCATAGTACGGAATTTCACTCGCCATATTCTTTGTGGATTGGCTTAC
TTGCATAGCAAAAAAACCATTCACAGGGACATAAAAGGAGCTAATTTGCTTGTTGATGCT
TATGGGGTTGTAAAGCTTGCAGATTTTGGGATGGCTAAGCACCTTAATGGGCAAGCAGCT
AATCTCTCCTTGAAGGGAAGTCCTTACTGGATGGCTCCTGAGCTCTTGCAGTCAGTTATG
CAGAAGGATACTAACAGTGATCTTGCCTTTGCTACTGACATATGGAGTTTGGGTTGTACA
GTAATTGAAATGCTGAATGGCAAACCACCTTGGAGTGAATATGAAGCAGCTGCAGCCATG
TTCAAGGTTCTAAAAGATACGCCTCCAATACCGGAAACATTATCACCTGAAGGGAAAGAT
TTCCTGCGCTGGTGTTTCTGTAGGAACCCAGCGGAGAGGCCCTCGGCCAGCATGTTATTA
GAACATCGATTTATGAGAATCTCTCATCAGCCAGATGTTCCTTCTTTCCTCAAACCAGTT
GGTGGGGTACGGATCAAAGTAAGAAAAGTTGAATTCTCAAAAAGAGCAGACAACATACAA
TCTTGA

Peptide Sequence

PEP ID

XP_016504816.1
PEP Infomation

PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like isoform X3 [Nicotiana tabacum]
Sequence

MRWWQSAFSSSTSSSSTSSLSSKVHSDDSLIPSSTGGGIRYTLKSAFFFARRRRHARAKK
FQNLAENDVDDWRSHYSENENLSSSKCSSSSNRRPPPQPLPLPELQLLLRHDADAAVSNE
PSVPLPSPTDAHNSHHKTGEERNKDTHKDGVASHGSRLSSQDARKKKKEHLGSRLSRKTP
QKLHVADRVSAIRISAPISAPTTPYASPGLSPLKAEDFLSPNCMAFPGAFQVCSAPEMPP
SDTPHYPGFSYKVIPEKNAFSVDNSPHHSPRASPLRSRKIASGSTSPLHNLLPHESSAAR
RESSAQGNVHPLPLPPLSATPPQQPSAIPPVSPNAELTPIKGQWQKGKLIGRGTFGSVYV
ASNRETGALCAMKEVELLPDDPKSAESIRQLQQEINVLSQLKHPNIVQYYGSEIVGDRFY
IYLEYVHPGSINKFIHDHCGAITESIVRNFTRHILCGLAYLHSKKTIHRDIKGANLLVDA
YGVVKLADFGMAKHLNGQAANLSLKGSPYWMAPELLQSVMQKDTNSDLAFATDIWSLGCT
VIEMLNGKPPWSEYEAAAAMFKVLKDTPPIPETLSPEGKDFLRWCFCRNPAERPSASMLL
EHRFMRISHQPDVPSFLKPVGGVRIKVRKVEFSKRADNIQS

Transcript Sequence

Gene sequence data has not been registered.